BIGpopA 2.0.0
BIGpopA
find_parentage() and validate_pedigree() now support any ploidy through a new ploidy argument (default 2).
find_parentage()andvalidate_pedigree()now support any ploidy through a newploidyargument (default 2). Genotypes may be coded as allele-B dosage (0, 1, …, ploidy).- Even ploidy uses a generalized polysomic gamete-range Mendelian test; it is exact for autopolyploids and conservative for allopolyploids (correct trios are never wrongly flagged).
- Odd ploidy (e.g. triploid), where balanced gametes are undefined, automatically falls back to a model-free opposite-homozygote exclusion evaluated on homozygous-informative markers only.
- Diploid results (
ploidy = 2) are unchanged from previous versions.
Release on GitHub · About BIGpopA
Back to top